Octave will use GraphicsMagick for reading and writing your images (not for plots, only used for image processing). This means that the GraphicsMagick configuration you have on you system will determine what your Octave installation can do. Most systems will have it on their own repositories. Unfortunately, their configuration is not always the best for image analysis as it can limit the bit depth when reading and writing of images.
To solve the problem, GraphicsMagick needs to be rebuilt with the appropriate settings. See below for tracking dependencies and the reasoning behind each flag. Once done, the following commands should work to build GraphicsMagick.
./configure --with-quantum-depth=16 --enable-shared --disable-static --with-magick-plus-plus=yes make make check sudo make install
The most common problem is the following warning when using
warning: your version of GraphicsMagick limits images to <N> bits per pixel
N can be 8, 16 or 32.
warning: your version of GraphicsMagick limits images to 8 bits per pixel
This warning means that GraphicsMagick was compiled with
--with-quantum-depth <N>, which implements that limitation. The INSTALL-unix page of GraphicsMagick documentation explains the rationale of this option.
There are several bug reports requesting package maintainers to compile GraphicsMagick with higher values. You should not create a new bug; instead look for open bugs for your system, and leave a comment there. For convenience, here are the links for the bugs reported against Debian, Ubuntu, and Fedora.
As versions with higher values are not available on the repositories, there are two ways to address this. The easiest is to suppress the warning, as suggested in the relevant bug report, if you know it won't affect your code. To do this, add the following command to your script:
The proper solution is to compile GraphicsMagick yourself, to pass the desired value to
--with-quantum-depth. You will also need to recompile Octave to use the freshly compiled Magick++ library.
Magick++ is the C++ application programming interface to GraphicsMagick. This is what Octave uses so you will need this when compiling GraphicsMagick. This will be enabled by default but if you don't have a C++ compiler installed (such as g++) GraphicsMagick will build just fine without a warning, just a small note during the run of configure.
The default is to disable shared libraries but that won't work with Octave. You will need to pass the
--enable-shared option. If you do not, Octave will give the following warning when running configure:
GraphicsMagick++ library fails tests. The imread function for reading image files will not be fully functional.
Compiling from source means tracking the dependencies yourself which may be a kind of painful. There's no wiki for GraphicsMagick so the following table hopes to makes things easier. Note however that this is the list of all dependencies and suggestions. For Octave purposes only, you definetely will not need all of these.
To start with you will obviously need the following
- a C compiler such as gcc
- a C++ compiler such as g++
These are the ones which support being enabled or disabled via the configure script options and are shown in the summary status at the end of the configure script run. You will need them at compile time.
|Dependency||Debian Wheezy||Ubuntu Precise||OpenSUSE 13.2|
|X11||libx11-dev libxext-dev libsm-dev|
These other dependendies are easily added via a user-editable text file after building and installation. They are much more specific and most users will have no need for them.
|Dependency||Debian Wheezy||Ubuntu Precise|