Octave for Debian systems: Difference between revisions
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libblas-dev ==> libopenblas-dev to use multiple cores
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* ''This article addresses the [[:Category:Installation|installation]] and [[Building]] of GNU Octave on Debian, and Debian-based distributions such as Ubuntu.'' | * ''This article addresses the [[:Category:Installation|installation]] and [[Building]] of GNU Octave on Debian, and Debian-based distributions such as Ubuntu.'' | ||
== Installing Octave == | |||
Binary packages for GNU Octave and many [[Octave Forge]] packages are provided by all versions of Debian and Ubuntu. These are the most well-tested binaries available and should work best for most users. To install them, run: | Binary packages for GNU Octave and many [[Octave Forge]] packages are provided by all versions of Debian and Ubuntu. These are the most well-tested binaries available and should work best for most users. To install them, run: | ||
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sudo apt-get install octave | sudo apt-get install octave | ||
== Building Octave == | == Building Octave from source == | ||
: ''For general build instructions, see [[Building]].'' | : ''For general build instructions, see [[Building]].'' | ||
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or, for the sake of convenience, use some "one-liner" to install them: | or, for the sake of convenience, use some "one-liner" to install them: | ||
* '''Ubuntu 22.04 (LTS)''' | |||
:<pre>sudo apt-get install gcc g++ autoconf automake bison dvipng epstool fig2dev flex gfortran gnuplot-x11 gperf gzip icoutils libarpack2-dev libopenblas-dev libcurl4-gnutls-dev libfftw3-dev libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl1-mesa-dev libgl2ps-dev libglpk-dev libgraphicsmagick++1-dev libhdf5-dev liblapack-dev libosmesa6-dev libpcre3-dev libqhull-dev libqscintilla2-qt5-dev libqrupdate-dev libreadline-dev librsvg2-bin libsndfile1-dev libsuitesparse-dev libsundials-dev libtool libxft-dev make openjdk-8-jdk perl portaudio19-dev pstoedit qtbase5-dev qttools5-dev qttools5-dev-tools rapidjson-dev rsync tar texinfo texlive-latex-extra zlib1g-dev</pre> | |||
(Some of these packages might only be needed when building from a repository checkout.) | |||
* '''Ubuntu 20.04 (LTS)''' | |||
:<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev fig2dev libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot-x11 libgraphicsmagick++1-dev libhdf5-dev openjdk-11-jdk libsndfile1-dev llvm-dev texinfo libgl1-mesa-dev pstoedit portaudio19-dev libqhull-dev libqrupdate-dev libsuitesparse-dev texlive-latex-extra libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar qtbase5-dev qttools5-dev qttools5-dev-tools libqscintilla2-qt5-dev libsundials-dev rapidjson-dev</pre> | |||
[[User:KaKiLa|KaKiLa]] ([[User talk:KaKiLa|talk]]) 03:34, 17 June 2020 (PDT) lpr conflict with cups-bsd | |||
* '''Ubuntu 19.10''' | |||
:<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev fig2dev libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot-x11 libgraphicsmagick++1-dev libhdf5-dev openjdk-8-jdk libsndfile1-dev llvm-dev lpr texinfo libgl1-mesa-dev pstoedit portaudio19-dev libqhull-dev libqrupdate-dev libsuitesparse-dev texlive-latex-extra texlive-libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar qtbase5-dev qttools5-dev qttools5-dev-tools libqscintilla2-qt5-dev libsundials-dev</pre> | |||
* '''Ubuntu 18.04 (LTS)''' | * '''Ubuntu 18.04 (LTS)''' | ||
:<pre>sudo apt-get install gcc g++ gfortran make | :<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev transfig libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot-x11 libgraphicsmagick++1-dev libhdf5-serial-dev openjdk-8-jdk libsndfile1-dev llvm-dev lpr texinfo libgl1-mesa-dev pstoedit portaudio19-dev libqhull-dev libqrupdate-dev libqscintilla2-dev libsuitesparse-dev texlive texlive-generic-recommended libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar qtbase5-dev qttools5-dev qttools5-dev-tools libqscintilla2-qt5-dev</pre> | ||
* '''Ubuntu 16.04 (LTS)''' | * '''Ubuntu 16.04 (LTS)''' | ||
:<pre>sudo apt-get install gcc g++ gfortran make | :<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev transfig libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot-x11 libgraphicsmagick++1-dev libhdf5-serial-dev openjdk-8-jdk libsndfile1-dev llvm-dev lpr texinfo libgl1-mesa-dev libosmesa6-dev pstoedit portaudio19-dev libqhull-dev libqrupdate-dev libqscintilla2-dev libqt4-dev libqtcore4 libqtwebkit4 libqt4-network libqtgui4 libqt4-opengl-dev libsuitesparse-dev texlive libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar</pre> | ||
* '''Debian 10''' | |||
:<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev fig2dev libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot libgraphicsmagick++1-dev libhdf5-dev openjdk-11-jdk libsndfile1-dev llvm-dev texinfo libgl1-mesa-dev libosmesa6-dev pstoedit portaudio19-dev libjack-jackd2-dev libqhull-dev libqrupdate-dev libqt5core5a qtbase5-dev qttools5-dev qttools5-dev-tools libqscintilla2-qt5-dev libsuitesparse-dev texlive texlive-latex-extra libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar libsundials-dev git</pre> | |||
* '''Debian 9''' | * '''Debian 9''' | ||
:<pre>sudo apt-get install gcc g++ gfortran make | :<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev transfig libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot libgraphicsmagick++1-dev libhdf5-serial-dev openjdk-8-jdk libsndfile1-dev llvm-dev texinfo libgl1-mesa-dev libosmesa6-dev pstoedit portaudio19-dev libjack-jackd2-dev libqhull-dev libqrupdate-dev libqscintilla2-dev libqt4-dev libqtcore4 libqtwebkit4 libqt4-network libqtgui4 libqt4-opengl-dev libsuitesparse-dev texlive libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar</pre> | ||
* '''Debian 8''' | * '''Debian 8''' | ||
:<pre>sudo apt-get install gcc g++ gfortran make | :<pre>sudo apt-get install gcc g++ gfortran make libopenblas-dev liblapack-dev libpcre3-dev libarpack2-dev libcurl4-gnutls-dev epstool libfftw3-dev transfig libfltk1.3-dev libfontconfig1-dev libfreetype6-dev libgl2ps-dev libglpk-dev libreadline-dev gnuplot libgraphicsmagick++1-dev libhdf5-serial-dev openjdk-7-jdk libsndfile1-dev llvm-dev lpr texinfo libgl1-mesa-dev libosmesa6-dev pstoedit portaudio19-dev libqhull-dev libqrupdate-dev libqscintilla2-dev libqt4-dev libqtcore4 libqtwebkit4 libqt4-network libqtgui4 libqt4-opengl-dev libsuitesparse-dev texlive libxft-dev zlib1g-dev autoconf automake bison flex gperf gzip icoutils librsvg2-bin libtool perl rsync tar</pre> | ||
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=== Configuration === | === Configuration === | ||
Some Debian and Ubuntu specific configure tweaks are listed below: | |||
==== Java ==== | ==== Java ==== | ||
Autodetection for | Autodetection for Java should work well on Debian-based systems. A specific Java version can be specified by passing {{codeline|JAVA_HOME}} to configure, for example | ||
./configure JAVA_HOME=/usr/lib/jvm/java-7-openjdk-amd64 | ./configure JAVA_HOME=/usr/lib/jvm/java-7-openjdk-amd64 | ||
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The problem is that there are multiple versions of the hdf5 package. Octave was written with the serial version in mind but it is likely to work with the others (OpenMPI and Mpich). Due to the naming scheme done in Debian, it may be required to specify the location of the libraries. See bug {{bug|38928}} for details (starting with comment #19) but basically, use the following when running configure: | The problem is that there are multiple versions of the hdf5 package. Octave was written with the serial version in mind but it is likely to work with the others (OpenMPI and Mpich). Due to the naming scheme done in Debian, it may be required to specify the location of the libraries. See bug {{bug|38928}} for details (starting with comment #19) but basically, use the following when running configure: | ||
./configure --with-hdf5-includedir=/usr/include/hdf5/serial --with-hdf5-libdir=/usr/lib/ | ./configure --with-hdf5-includedir=/usr/include/hdf5/serial --with-hdf5-libdir=/usr/lib/$(dpkg-architecture -qDEB_HOST_MULTIARCH)/hdf5/serial | ||
On older versions of Debian and Ubuntu, where only one flavor of the HDF5 library could be installed at a time, you may need to build Octave against one of the MPI-enabled flavors. On these older systems, configuring Octave like this may work: | On older versions of Debian and Ubuntu, where only one flavor of the HDF5 library could be installed at a time, you may need to build Octave against one of the MPI-enabled flavors. On these older systems, configuring Octave like this may work: | ||
./configure CPPFLAGS="-I/usr/include/mpi -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX" | ./configure CPPFLAGS="-I/usr/include/mpi -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX" | ||
==== Sundials ==== | |||
On recent Debian and Ubuntu releases whose Sundials version (in {{codeline|libsundials-dev}}) is 3.1, a configure flag needs to be passed for {{codeline|ode15i}} and {{codeline|ode15s}} to be compiled with support for sparse Jacobians (bug {{bug|55937}}), as follows: | |||
./configure CPPFLAGS="-I/usr/include/suitesparse" | |||
== See also == | == See also == | ||