Dicom package: Difference between revisions

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361 bytes added ,  14 June 2019
Unified layout. Revisit links https.
(tidied questions section a bit)
(Unified layout. Revisit links https.)
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At an early development stage. [http://octave.svn.sourceforge.net/viewvc/octave/trunk/octave-forge/extra/dicom/ octave-forge svn]
The {{Forge|dicom}} package is part of the [[Octave Forge]] project.  The package is at an early development stage and it is maintained by Andy Buckle with contributions by Judd Storrs and Kris Thielemans.
*Maintainer: Andy Buckle [http://sourceforge.net/sendmessage.php?touser=1760416contact]
*Contributors: Judd Storrs, Kris Thielemans
 
Auto-generated docs from the current package: {{Forge|dicom}}


== What is the aim of this package? ==
== What is the aim of this package? ==
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== Platforms ==
== Platforms ==
{{Warning|The information of this section needs be reviewed (June 2019).}}
*Linux. Tested on OpenSuSE 11.4 and Ubuntu. No known issues. GDCM is required: see below.
*Linux. Tested on OpenSuSE 11.4 and Ubuntu. No known issues. GDCM is required: see below.
*mingw  
*mingw  
**Ben Lindner's Octave 3.2.4 and the mingw build environment (gcc 4.4.0): dicom package 0.1.1 does not build against this older version of the Octave API.
**Ben Lindner's Octave 3.2.4 and the mingw build environment (gcc 4.4.0): dicom package 0.1.1 does not build against this older version of the Octave API.
**Tatsuro/Nitzan's Octave 3.4.3 and mingw build environment (gcc 4.5.2): gdcm and dicom package build OK. Get segfault in ntdll.dll when one of the dicom*.oct files calls something from a gdcm*.dll.
**Tatsuro/Nitzan's Octave 3.4.3 and mingw build environment (gcc 4.5.2): gdcm and dicom package build OK. Get segfault in ntdll.dll when one of the dicom*.oct files calls something from a gdcm*.dll.
*cygwin: gdcm 2.0.18-19 does not build. link error in gdcmMSFF.
**mxe-octave: dicom and gdcm distributed as part of the installed package.
*Cygwin: Panic when oct file called (or maybe when oct file uses gdcm dll). Need to try rebaseall


==Supporting library==
==Supporting library==
[http://sourceforge.net/apps/mediawiki/gdcm/index.php?title=Main_Page GCDM]. You can usually get this via your package manager, e.g. on Ubuntu
[http://gdcm.sourceforge.net/wiki/index.php/Main_Page GDCM]. You can usually get this via your package manager, e.g. on Ubuntu


  sudo apt-get install libgdcm2.0
  sudo apt-get install libgdcm2.0


Alternatively, build it yourself. Get the source with subversion.
Alternatively, build it yourself. Get the source with git.


  svn co https://gdcm.svn.sourceforge.net/svnroot/gdcm/branches/gdcm-2-0
  git clone https://git.code.sf.net/p/gdcm/gdcm


cmake and g++ are required. create a gdcmbin directory parallel to the gdcm-2-0 directory. Change to gdcmbin and then run cmake (Linux/cygwin).
cmake and g++ are required. create a gdcmbin directory parallel to the gdcm-2-0 directory. Change to gdcmbin and then run cmake (Linux/cygwin).
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  cmake -G "MinGW Makefile" -DGDCM_BUILD_SHARED_LIBS=ON ..\gdcm-2-0
  cmake -G "MinGW Makefile" -DGDCM_BUILD_SHARED_LIBS=ON ..\gdcm-2-0
  mingw32-make all
  mingw32-make all
On Cygwin gdcm 2.0.18 (and maybe some other versions) may have a problem with newer cmake. This kludge persuades cmake to define WIN32.
cmake -DGDCM_BUILD_SHARED_LIBS=ON -DCMAKE_CXX_COMPILER=g++.exe -DCMAKE_LEGACY_CYGWIN_WIN32=1 ../gdcm-2.0.18/


==Features==
==Features==
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*dicomlookup (keyword <-> tag)
*dicomlookup (keyword <-> tag)
*dicomread (load pixel data, 2D or 3D int types. Does not yield colormaps, yet.)
*dicomread (load pixel data, 2D or 3D int types. Does not yield colormaps, yet.)
*dicomwrite (write pixel data to a DICOM format file)
*dicomuid (generate a DICOM unique id)
*isdicom (verify if a file is a DICOM formatted file)


==Todo==
==Todo==


*dicomanon
*dicomanon
*dicomuid
*dicomwrite
*isdicom


==Questions==
==Questions==
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== See also ==
== See also ==
* {{Forge|dicom}} at [[Octave Forge]].
* {{Forge|dicom}} at [[Octave Forge]].
* [http://sourceforge.net/projects/gdcm/ Grassroots DICOM].
* [https://sourceforge.net/projects/gdcm/ Grassroots DICOM].


[[Category:OctaveForge]]
[[Category:Octave Forge]]
[[Category:Packages]]

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