Build from source: Difference between revisions
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=System Specific Instructions= | =System Specific Instructions= | ||
[http://wiki.octave.org/wiki.pl?PaulKienzleIrixConf SGI/IRIX | [http://wiki.octave.org/wiki.pl?PaulKienzleIrixConf SGI/IRIX] | ||
[http://wiki.octave.org/wiki.pl?OctaveForMac Mac OS X | [http://wiki.octave.org/wiki.pl?OctaveForMac Mac OS X] | ||
[http://wiki.octave.org/wiki.pl?OctaveForGNULinux#DebianDevelopmentSources Debian | [http://wiki.octave.org/wiki.pl?OctaveForGNULinux#DebianDevelopmentSources Debian] | ||
=Distributed building= | =Distributed building= |
Revision as of 10:20, 16 November 2011
Compiling from source is probably the most effective way of installing Octave on your system. To do this you will require compilers for the following languages:
- C
- C++ (ISO)
- Fortran
The best supported compilers for the job are the GNU Compiler Collection. You will require at least GCC 4.3 or later, although GCC 4.4 or later is recommended.
To compile Octave, you will also need a recent version of GNU Make. You must have GNU Make to compile octave. Octave's Makefiles use features of GNU Make that are not present in other versions of make. GNU Make is very portable and easy to install.
Required or Useful Tools
- autoconf
- automake
- GNU sed
- GNU awk
- GNU make
- nm
- flex
- bison
- less
- gperf (if building from scratch)
- perl (also if building from scratch) or python
- gnuplot
- texinfo
- ghostscript
- a TeX? distribution (if building the documentation)
Required or Useful Libraries
- readline
- ncurses
- zlib
- A version of BLAS and LAPACK, e.g. Atlas
- fftw
- glpk
- SuiteSparse? (without metis due to licensing issues): UMFPACK - AMD - CAMD - COLAMD - CCOLAMD - CHOLMOD - CXSPARSE
- arpack (new GPL-conformant version)
- qrupdate
- hdf5
- pcre
- curl
- qhull
- fltk
- libmagick++
Note for users of Debian stable "lenny", as of 2010/07/09, you can install these dependencies with apt-get install autoconf automake flex bison gperf gnuplot libreadline5-dev libncurses5-dev zlib1g-dev \ libatlas-base-dev fftw3-dev libglpk-dev libsuitesparse-dev libarpack2-dev libhdf5-mpich-dev \ libpcre3-dev libcurl4-gnutls-dev libqhull-dev gfortran libfltk1.1-dev libgraphicsmagick++1-dev Qrupdate is missing, but it is easy to install from http://qrupdate.sourceforge.net I also had to add a line #include "GL/glu.h" in src/DLD-FUNCTIONS/fltk_backend.cc.
Download
Released source tarballs are available at [1]. You will normally want to use one of those.
The download page also contains instructions to download the development sources. If you are using the development sources, be sure to type the following command before configuring:
./autogen.sh
This builds the configure scripts that Octave uses. This requires a number of tools which are not needed if you download an octave release, such as recent versions of autoconf/automake, and tools such as bison, flex, gperf, perl, and maybe others.
Configure
Octave has many configure options. For a complete list, see
./configure --help
By default octave compiles as a static binary which cannot be extended with separately compiled C, C++, or Fortran functions such as those provided with OctaveForge (you might get an error like "ld: fatal: relocations remain against allocatable but non-writable sections" when compiling OctaveForge). For that you will need to configure octave with
./configure --enable-shared --disable-static
The --disable-static option is not necessary, but it will make your compile faster.
If you are building a personal version, you will want to install it into your home directory, or perhaps a subdirectory. Add the following to your configure line:
--prefix=$HOME/octave
Be sure the $HOME/octave/bin is on your path, or symlink the binaries therein to $HOME/bin.
Troubleshooting
1. If you just type ./configure, you may get this error:
configure: WARNING: in order to build octave, you must have a compatible configure: WARNING: Fortran compiler or f2c installed and in your path. configure: error: See the file INSTALL for more information.
This means that you don't have a fortran compiler on your system. You can either install a fortran compiler or re-install gcc with its optional build-in fortran compiler g77. To do this you must download the g77 components of gcc before you build gcc. Alternatively there are various f2c programs you could install which convert fortran to C.
2. If you get this warning:
configure: WARNING: "FTGL headers not found. Native renderer will not have on-screen text" configure: WARNING: configure: WARNING: I didn't find the necessary libraries to compile native configure: WARNING: graphics. It isn't necessary to have native graphics configure: WARNING: but you will have to use gnuplot or you won't be able configure: WARNING: to use any of Octave's plotting commands
It may help to call configure with CPPFLAGS=-I/usr/include/freetype2, please see [http://www-old.cae.wisc.edu/pipermail/octave-maintainers/2008-September/008620.html Problems with FTGL building octave-3.1.51,[Building ftgl backend with current tip]. Note that from changeset 8269 onward, this workaround should no longer be needed, please see No FTGL, says configure script?
Build
make
Troubleshooting
Another possible error occurs at the 'make' stage:
/usr/include/c++/3.3.1/bits/basic_string.h:228: undefined reference to `std::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_empty_rep_storage' collect2: ld returned 1 exit status make[2]: *** [octave] Error 1
This has something to do with the gcc configuration. Try compiling the following program using g++:
#include <string> #include <iostream> using namespace std; int main (void) { basic_string <char>a = "thing one"; string b = "thing two"; cout << a.c_str() << endl; return (a == b); }
If it fails, then your compiler needs to be set-up differently (how?). On my machine I can compile that test program but still get the error making Octave -- how do we solve this? It has something to do with the shared C++ library versions, check for /usr/lib/libstdc++.so.6 and make sure the right version of that library is being used by gcc -- especially if you had to reinstall gcc to build the fortran support. If it still doesn't work, consider installing from the RPMs instead of compiling from source.
Test
To run all tests, change to the octave directory and type
make check
This requires dejagnu.
To run a specific set of tests, change to the directory test/octave.test/<part> and type
runtest <part>.exp
To run your own tests use the RunInPlace shell script.
Install
make install
System Specific Instructions
Distributed building
Requirements
distcc ccache
Install distcc on all machines taking part in the compilation. List them in ~/.distcc/hosts:
localhost pc1.mynet.org pc2.mynet.org
The first machines listed are given higher priority -- place 'localhost' as you see fit.
Set the environment variables CCACHE_PREFIX, CXX and CC:
export CCACHE_PREFIX="distcc" export CXX="ccache g++" export CC="ccache gcc" ./configure <options>
Compile using the -j<simultaneous-jobs> flag, two jobs per CPU available, i.e. for 5 machines
make -j10